I guess it depends on which brake systems you are really trying to compare.
If you are using a kit that is comprised of OEM abutments and calipers... this pretty much allows you to get replacement parts from just about everywhere. Whereas... with the Wilwood stuff... you can not. Maybe this is or is not a big issue... but if you do a lot of driving or if this is a daily driver... the down time waiting for parts to show up in the mail can make a difference.
Performance wise... they are pretty on an even plain. The high dollar kits from either of them are comparable. The mid range stuff leans a little towards the Wilwoods (repeatability and overall performance)... as this is where caliper construction of Wilwood makes the biggest difference. And then on the lower end... the OEM kills Wilwood.
For the money... the Baer GT stuff is damn hard to beat. Then to get into a six piston set-up... the Wilwoods start to shine. Iguess this really comes down to what you are looking at and how much you really want to spend.
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