If it’s still sitting high without the seal then adding a shim under the rear most hinge bolts between deck lid and hinge should lower it. 1/8 should make a significant improvement.
If it’s the seal pushing it up Metro makes a seal with a hollow core that compresses more easily. If that doesn’t work don’t be afraid to cut the seal down on the side that installs in the gutter channel so it can’t be seen.
https://www.summitracing.com/parts/mmp-tk46-o
Don